Calculate the average number of junctions in a single chromosome
after t generations, provided information on the initial heterozygosity,
population size and the number of generations.
Usage
number_of_junctions(N = Inf, R = Inf, H_0 = 0.5, C = 1, t = 100)
Arguments
- N
Population Size
- R
Number of genetic markers
- H_0
Frequency of heterozygosity at t = 0
- C
Mean number of crossovers per meiosis (e.g. size in Morgan of the
chromosome)
- t
Time since admixture
Value
Estimated number of junctions at time t
Examples
jt <- number_of_junctions(N = 100, R = 1000, H_0 = 0.5, C = 1, t = 1000)
jt2 <- number_of_junctions(N = 100, R = 1000, H_0 = 0.5, C = 1, t = 0:1000)